OncoSignal
Live from Open Targets Platform, fetched 2026-11-12 03:58 UTC. Every row links to its source record.

RUNX1 RUNX family transcription factor 1

ENSG00000159216 · protein coding · Open Targets profile

Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. The heterodimers bind to the core site of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, LCK, IL3 and GM-CSF promoters (Probable). Essential for the development of normal hematopoiesis (PubMed:17431401). Acts synergistically with ELF4 to transactivate the IL-3 promoter and with ELF2 to transactivate the BLK promoter (PubMed:10207087, PubMed:14970218). Inhibits KAT6B-dependent transcriptional activation (By similarity). Involved in lineage commitment of immature T cell precursors. CBF complexes repress ZBTB7B transcription factor during cytotoxic (CD8+) T cell development. They bind to RUNX-binding sequence within the ZBTB7B locus acting as transcriptional silencer and allowing for cytotoxic T cell differentiation. CBF complexes binding to the transcriptional silencer is essential for recruitment of nuclear protein complexes that catalyze epigenetic modifications to establish epigenetic ZBTB7B silencing (By similarity). Controls the anergy and suppressive function of regulatory T-cells (Treg) by associating with FOXP3. Activates the expression of IL2 and IFNG and down-regulates the expression of TNFRSF18, IL2RA and CTLA4, in conventional T-cells (PubMed:17377532). Positively regulates the expression of RORC in T-helper 17 cells (By similarity). {ECO:0000250|UniProtKB:Q03347, ECO:0000269|PubMed:10207087, ECO:0000269|PubMed:11965546, ECO:0000269|PubMed:14970218, ECO:0000269|PubMed:17377532, ECO:0000269|PubMed:17431401, ECO:0000305}.

In 9 of 15 cancers, the evidence for RUNX1 comes mainly from inherited variants

Each row is a cancer, strongest overall evidence first. The two dots show how strong the inherited (germline) and tumour-mutation (somatic) evidence is; the line between them is the gap.

Inherited (germline) variantsMutations in tumours (somatic)
00.250.50.751hereditary thrombocytopenia and hematol…hereditary thrombocytopenia and hematological cancer predisposition syndrome associated with RUNX1hereditary thrombocytopenia and hematological cancer predisposition syndrome associated with RUNX1: germline 0.90hereditary thrombocytopenia and hematol…hereditary thrombocytopenia and hematologic cancer predisposition syndromehereditary thrombocytopenia and hematologic cancer predisposition syndrome: germline 0.90acute myeloid leukemiaacute myeloid leukemiaacute myeloid leukemia: somatic 0.78acute myeloid leukemia: germline 0.87myeloproliferative disordermyeloproliferative disordermyeloproliferative disorder: somatic 0.46myeloproliferative disorder: germline 0.56acute myeloid leukemia with minimal dif…acute myeloid leukemia with minimal differentiationmyelodysplastic syndromemyelodysplastic syndromemyelodysplastic syndrome: somatic 0.46myelodysplastic syndrome: germline 0.61acute lymphoblastic leukemiaacute lymphoblastic leukemiaacute lymphoblastic leukemia: somatic 0.57breast adenocarcinomabreast adenocarcinomabreast adenocarcinoma: somatic 0.66esophageal squamous cell carcinomaesophageal squamous cell carcinomaesophageal squamous cell carcinoma: somatic 0.46esophageal squamous cell carcinoma: germline 0.54clonal hematopoiesisclonal hematopoiesisclonal hematopoiesis: germline 0.64chronic myelomonocytic leukemiachronic myelomonocytic leukemiachronic myelomonocytic leukemia: somatic 0.61carcinoma of esophaguscarcinoma of esophaguscarcinoma of esophagus: somatic 0.30carcinoma of esophagus: germline 0.55acquired polycythemia veraacquired polycythemia veraacquired polycythemia vera: somatic 0.30acquired polycythemia vera: germline 0.53T-cell acute lymphoblastic leukemiaT-cell acute lymphoblastic leukemiaT-cell acute lymphoblastic leukemia: somatic 0.61B-cell acute lymphoblastic leukemiaB-cell acute lymphoblastic leukemiaB-cell acute lymphoblastic leukemia: somatic 0.61

Scores run from 0 (no evidence) to 1 (strongest). A missing dot at 0 means Open Targets holds no evidence of that kind. Source: Open Targets Platform, fetched live.

Tractability

Small molecule
High-Quality Ligand, High-Quality Pocket
PROTAC
Database Ubiquitination, Half-life Data, Small Molecule Binder

gnomAD loss of function constraint: o/e 0.443589985370636 (upper bound 0.6508899927139282). Low values mean loss of function is poorly tolerated, a safety flag for inhibition.

Who runs trials of these drugs

No named investigators on registry trials of RUNX1's approved or late-stage drugs in the last three years.

No terminated, withdrawn or suspended trials of RUNX1's drugs are registered

All 0 drugs and clinical candidates as a table

Each drug, stage and indication links to its Open Targets record, where the trials and approvals behind it are listed. Salt forms (for example a mesylate) are listed as Open Targets records them, as separate entries.

DrugTypeHighest stageIndicationsSource records
No drugs or clinical candidates recorded.